Publications

Publications by categories in reversed chronological order.

2026

  1. CodeV: Code with Images for Faithful Visual Reasoning via Tool-Aware Policy Optimization
    Xinhai Hou, Shaoyuan Xu, Manan Biyani, and 4 more authors
    In Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition , 2026
  2. CORRECT: COndensed eRror RECognition via knowledge Transfer in multi-agent systems
    Yifan Yu, Moyan Li, Shaoyuan Xu, and 4 more authors
    In International Conference on Machine Learning , 2026
  3. Learning neuroimaging models from health system-scale data
    Yiwei Lyu, Samir Harake, Asadur Chowdury, and 18 more authors
    Nature Biomedical Engineering, 2026
  4. Intelligent histology for tumor neurosurgery
    Xinhai Hou, Akhil V Kondepudi, Cheng Jiang, and 27 more authors
    Neuro-Oncology Advances, 2026
  5. AI-driven label-free Raman spectromics for intraoperative spinal tumor assessment
    David Reinecke, Niklas Müller, Anna-Katharina Meissner, and 20 more authors
    npj Digital Medicine, 2026
  6. Towards Scalable Language-Image Pre-training for 3D Medical Imaging
    Chenhui Zhao, Yiwei Lyu, Asadur Zaman Chowdury, and 6 more authors
    Transactions on Machine Learning Research, 2026

2025

  1. kondepudi2025health_teaser.png
    Health system learning achieves generalist neuroimaging models
    Akhil Kondepudi, Akshay Rao, Chenhui Zhao, and 14 more authors
    2025
  2. Protocol to annotate and automate single-cell instance segmentation on stimulated Raman histology using deep learning
    Abhishek Bhattacharya, Eric Landgraf, Cheng Jiang, and 7 more authors
    STAR Protocols, 2025
  3. Step-calibrated diffusion for biomedical optical image restoration
    Yiwei Lyu, Sung Jik Cha, Cheng Jiang, and 7 more authors
    Proceedings of the AAAI Conference on Artificial Intelligence, 2025, 2025
  4. Foundation models for fast, label-free detection of glioma infiltration
    Akhil Kondepudi, Melike Pekmezci, Xinhai Hou, and 8 more authors
    Nature, 2025

2024

  1. Super-resolution of biomedical volumes with 2D supervision
    Cheng Jiang, Alexander Gedeon, Yiwei Lyu, and 7 more authors
    In Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR) workshops , 2024
  2. A self-supervised framework for learning whole slide representations
    Xinhai Hou, Cheng Jiang, Akhil Kondepudi, and 4 more authors
    Neural Information Processing Systems Workshop on Advancements In Medical Foundation Models, 2024

2023

  1. Hierarchical discriminative learning improves visual representations of biomedical microscopy
    Cheng Jiang*, Xinhai Hou*, Akhil Kondepudi, and 5 more authors
    In Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition , 2023

2022

  1. OpenSRH: optimizing brain tumor surgery using intraoperative stimulated Raman histology
    Cheng Jiang*, Asadur Chowdury*, Xinhai Hou*, and 7 more authors
    Advances in neural information processing systems, 2022

2021

  1. Valproic acid-induced changes of 4D nuclear morphology in astrocyte cells
    Alexandr A Kalinin, Xinhai Hou, Alex S Ade, and 8 more authors
    Molecular Biology of the Cell, 2021